GMT Tutorial Exercise 20 - Workflow 2 - Step 4
Select the "Whole Genome Scan" build(s) of interest from the drop-down box
Please note:
The information regarding the number of markers available in the different "Whole Genome Scan" kits (see brown box below) needs to be updated.
Please refer to the information on this page instead: GMT_Tutorial_Exercise_19#Marker_Screening:
Jbrueggemann 00:49, 2 June 2009 (UTC)
The Whole Genome Scan Kits:
- The Whole Genome Scan kits are pre-selected sets of markers that tend to be highly polymorphic and provide good whole genome coverage.
- For wheat, two Whole Genome Scan kits are available; "Build#1" has 462, "Build#2" has 387 markers.
The markers in the two kits are non-redundant, so by using the two kits together, 849 different markers can be screened, offering increasingly dense genome coverage.
- For barley, currently only the Whole Genome Scan kit "Build#1" with 192 markers is available.
- Please contact Matt Hayden for further information and access to the kits.
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- To see markers in a Whole Genome Scan kit highlighted on the genetic maps in the Polymorphism Viewer macros, select the kit from the drop-down box under instruction (2) on the macro's Main Page:
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