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 Bioinformatics for Molecular Plant Breeding

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ADMIN»SPECIES

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Contents

Description

  • All users can use ADMIN»SPECIES to view information on species available in GENica Marker Tools.
  • Group administrators can add new species to GMT as well as edit and delete existing entries.


How to use this option

  • To open this page, click on ADMIN, then on SPECIES on the GENica Marker Tools menu.
  • A table with the species that have been entered previously into GMT appears, see screenshot below. The table can be sorted by the different column headers by clicking on them.
  • Click on a link next to a species to carry out the following actions:
    • [NCBI]: Launch a search of the NCBI Taxonomy Browser with the "NCBI Taxonomy ID" entered for the species under header NCBI Tax ID.
    • [EDIT]: Update / correct an existing species entry. Note that only the "common" and the "full" name can be changed, but not the NCBI taxonomy ID of a species. This option is restricted to group administrators.
    • [DELETE]: Delete a species entry. This option is restricted to group administrators.
  • Click on the [ADD] link to enter a new species entry. This option is restricted to group administrators.
    • NCBI Taxonomy ID: Please identify the entry for this field by searching the NCBI Taxonomy Browser for the new species to be added.
    • Common Name: Please use this field to enter the commonly used name of a species.
    • Full Name: Please use this field to enter the scientific name of a species.



Links to other user manual pages

MARKERS

»SEARCH
»SETS
»IMPORT

BINNER

»MRT TAGS
»MRT UPLOAD
»SNP TAGS
»SNP UPLOAD

GEMDB

»SEARCH
»BROWSE
»CONFLICT
»IMPORT

DARTS

»SEARCH
»BROWSE
»IMPORT

SNPDB

»SEARCH
»BROWSE
»IMPORT

TAGS

»MARKERS
»GEMDB
»GEMDB SAMPLE
»DARTS
»DARTS SAMPLE
»SNPDB
»SNPDB SAMPLE

FILES

»LIST
»UPLOAD

OPTIONS ADMIN

»DASHBOARD
 »SPECIES
Non-admin users:
»EDIT MY DETAILS
»MY GROUPS
Group admin users:
»MARKER DB IMPORT
»SNP MARKER DB IMPORT
»ELECTROGRAM IMAGE UPLOAD
»USERS
»GROUPS
Selected group admin users only:
»DArT MARKER DB IMPORT

I'd rather try the tutorial...Written in August 2007


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